ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028268 Gbp3 10090 + 3:142560026-142573209 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029935 Gbp3-001 142560145-142573209 protein_coding
  ENSMUST00000106221 Gbp3-003 142560411-142573207 protein_coding
  ENSMUST00000106222 Gbp3-002 142560052-142573202 protein_coding
  ENSMUST00000128609 Gbp3-004 142560143-142564183 protein_coding
  ENSMUST00000142060 Gbp3-005 142561234-142565054 protein_coding
  ENSMUST00000142731 Gbp3-006 142560175-142565508 processed_transcript
  ENSMUST00000199325 Gbp3-007 142560026-142561935 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000029935ENSMUST00000106221ENSMUST00000106222ENSMUST00000199325
Transcript ID C166 Tie2+ EC mES
ENSMUST00000029935 N/A N/A 0.007±0.00
ENSMUST00000106221 0.241±0.04 5.931±3.22 0.061±0.00
ENSMUST00000106222 0.900±0.16 2.963±1.58 0.028±0.01
ENSMUST00000199325 N/A N/A 0.088±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000033 CIL_000033_000D CGP
CIL_000033 CIL_000033_000C CGP
CIL_000033 CIL_000033_0009 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 ISS GTPase activity
GO:0005525 IEA GTP binding
GO:0005634 IEA nucleus
GO:0005829 IDA cytosol
GO:0006184 IEA GTP catabolic process
GO:0020005 IDA symbiont-containing vacuole membrane
GO:0031410 IDA cytoplasmic vesicle
GO:0035458 IDA cellular response to interferon-beta
GO:0042832 IDA defense response to protozoan
GO:0044406 IDA adhesion of symbiont to host
GO:0050830 IDA defense response to Gram-positive bacterium
GO:0071346 IDA cellular response to interferon-gamma

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005627 CABZ01068209.1 protein_coding Danio_rerio
ENSDARG00000034063 CABZ01068208.1 protein_coding Danio_rerio
ENSDARG00000038668 gbp1 protein_coding Danio_rerio
ENSDARG00000038669 gbp2 protein_coding Danio_rerio
ENSDARG00000068857 gbp4 protein_coding Danio_rerio
ENSG00000162654 GBP4 guanylate binding protein 4 protein_coding Homo_sapiens
ENSG00000213512 GBP7 guanylate binding protein 7 protein_coding Homo_sapiens

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