ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028898 Trnau1ap 10090 - 4:132311763-132329538 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030730 Trnau1ap-001 132311763-132329538 protein_coding
  ENSMUST00000105960 Trnau1ap-004 132321679-132329538 protein_coding
  ENSMUST00000105962 Trnau1ap-007 132311763-132329489 protein_coding
  ENSMUST00000125513 Trnau1ap-009 132314353-132329538 nonsense_mediated_decay
  ENSMUST00000127402 Trnau1ap-012 132314207-132329414 protein_coding
  ENSMUST00000131524 Trnau1ap-008 132314350-132329482 processed_transcript
  ENSMUST00000137520 Trnau1ap-006 132314313-132329504 nonsense_mediated_decay
  ENSMUST00000141317 Trnau1ap-005 132328109-132329515 retained_intron
  ENSMUST00000144387 Trnau1ap-010 132321201-132325276 retained_intron
  ENSMUST00000146166 Trnau1ap-002 132311765-132329516 retained_intron
  ENSMUST00000147652 Trnau1ap-003 132311865-132329389 nonsense_mediated_decay
  ENSMUST00000150959 Trnau1ap-011 132311849-132329494 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000030730ENSMUST00000131524ENSMUST00000146166ENSMUST00000147652
Transcript ID C166 Tie2+ EC mES
ENSMUST00000030730 13.200±3.51 32.562±2.19 8.128±3.29
ENSMUST00000131524 7.536±0.14 N/A N/A
ENSMUST00000146166 N/A 1.210±0.08 N/A
ENSMUST00000147652 4.014±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00099N CIL_00099N_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001514 IDA selenocysteine incorporation
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000180098 TRNAU1AP tRNA selenocysteine 1 associated protein 1 protein_coding Homo_sapiens

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