ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028954 Nub1 10090 + 5:24685532-24710378 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068825 Nub1-003 24685824-24710378 protein_coding
  ENSMUST00000197407 Nub1-001 24685532-24710376 protein_coding
  ENSMUST00000200337 Nub1-002 24685987-24710376 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000068825ENSMUST00000197407ENSMUST00000200337
Transcript ID C166 Tie2+ EC mES
ENSMUST00000068825 20.643±8.95 6.852±4.62 6.778±0.66
ENSMUST00000197407 3.109±0.00 2.862±0.00 2.997±0.09
ENSMUST00000200337 N/A 2.170±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007RX CIL_0007RX_0002 VISTA
CIL_0004EL CIL_0004EL_0002 CGP
CIL_0004EK CIL_0004EK_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0006511 ISS ubiquitin-dependent protein catabolic process
GO:0016567 ISS protein ubiquitination
GO:0032436 ISS positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0034341 IEA response to interferon-gamma
GO:0034612 IEA response to tumor necrosis factor

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061417 nub1 protein_coding Danio_rerio
ENSG00000013374 NUB1 negative regulator of ubiquitin-like proteins 1 protein_coding Homo_sapiens

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