ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029086 Prom1 10090 - 5:43993620-44102032 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030973 Prom1-008 44001443-44094713 protein_coding
  ENSMUST00000074113 Prom1-002 43993620-44101954 protein_coding
  ENSMUST00000087441 Prom1-007 43993622-44101681 protein_coding
  ENSMUST00000087442 Prom1-201 44001443-44094768 protein_coding
  ENSMUST00000165909 Prom1-004 43993622-44099225 protein_coding
  ENSMUST00000171543 Prom1-001 43993622-44102032 protein_coding
  ENSMUST00000177946 Prom1-202 43993625-44094768 protein_coding
  ENSMUST00000179059 Prom1-203 43993625-44094768 protein_coding
  ENSMUST00000195942 Prom1-011 44047593-44067685 processed_transcript
  ENSMUST00000196178 Prom1-012 44056069-44099186 protein_coding
  ENSMUST00000196378 Prom1-006 43993622-44004919 protein_coding
  ENSMUST00000196852 Prom1-003 44044024-44101958 retained_intron
  ENSMUST00000196853 Prom1-016 44012499-44033020 retained_intron
  ENSMUST00000197706 Prom1-009 44001443-44094713 protein_coding
  ENSMUST00000197749 Prom1-013 44029680-44044647 retained_intron
  ENSMUST00000197750 Prom1-005 44001280-44099192 protein_coding
  ENSMUST00000198218 Prom1-010 44099655-44101958 processed_transcript
  ENSMUST00000198347 Prom1-014 44026795-44045573 nonsense_mediated_decay
  ENSMUST00000199739 Prom1-015 44033670-44037665 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000074113ENSMUST00000087441ENSMUST00000196378ENSMUST00000198347ENSMUST00000199739
Transcript ID C166 Tie2+ EC mES
ENSMUST00000074113 N/A 31.201±0.00 N/A
ENSMUST00000087441 N/A 88.259±56.22 2.678±0.00
ENSMUST00000196378 N/A 9.736±0.00 3.169±0.10
ENSMUST00000198347 0.035±0.01 N/A N/A
ENSMUST00000199739 0.120±0.05 1.973±0.00 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001750 IDA photoreceptor outer segment
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005783 ISS endoplasmic reticulum
GO:0005793 ISS endoplasmic reticulum-Golgi intermediate compartment
GO:0005886 ISS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0005902 IDA microvillus
GO:0005903 IDA brush border
GO:0005929 IDA cilium
GO:0009986 IDA cell surface
GO:0010842 IMP retina layer formation
GO:0016324 IDA apical plasma membrane
GO:0031982 IEA vesicle
GO:0032420 IDA stereocilium
GO:0042622 IEA photoreceptor outer segment membrane
GO:0042805 IEA actinin binding
GO:0042995 IDA cell projection
GO:0045296 IEA cadherin binding
GO:0045494 IEA photoreceptor cell maintenance
GO:0060042 IEA retina morphogenesis in camera-type eye
GO:0060219 IMP camera-type eye photoreceptor cell differentiation
GO:0070062 IEA extracellular vesicular exosome
GO:0071914 IDA prominosome
GO:0072112 IEA glomerular visceral epithelial cell differentiation
GO:0072139 IEA glomerular parietal epithelial cell differentiation
GO:2000768 IEA positive regulation of nephron tubule epithelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034007 prom1b protein_coding Danio_rerio
ENSDARG00000039966 prom1a protein_coding Danio_rerio
ENSG00000007062 PROM1 prominin 1 protein_coding Homo_sapiens

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