ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029227 Fip1l1 10090 + 5:74535449-74598800 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000080164 Fip1l1-001 74535449-74598790 protein_coding
  ENSMUST00000113534 Fip1l1-007 74535479-74592430 protein_coding
  ENSMUST00000113535 Fip1l1-004 74535481-74596145 protein_coding
  ENSMUST00000113536 Fip1l1-003 74535471-74598800 protein_coding
  ENSMUST00000120618 Fip1l1-005 74535503-74591812 protein_coding
  ENSMUST00000121950 Fip1l1-012 74535684-74585431 retained_intron
  ENSMUST00000125129 Fip1l1-011 74594720-74595930 retained_intron
  ENSMUST00000135377 Fip1l1-010 74535484-74540566 retained_intron
  ENSMUST00000139697 Fip1l1-009 74586803-74592002 retained_intron
  ENSMUST00000200787 Fip1l1-002 74584737-74591912 retained_intron
  ENSMUST00000200979 Fip1l1-013 74535979-74545452 processed_transcript
  ENSMUST00000201310 Fip1l1-006 74586129-74588418 retained_intron
  ENSMUST00000202499 Fip1l1-008 74584782-74588223 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000080164ENSMUST00000113535ENSMUST00000113536ENSMUST00000120618
Transcript ID C166 Tie2+ EC mES
ENSMUST00000080164 6.058±0.00 N/A N/A
ENSMUST00000113535 25.660±3.04 10.402±2.03 21.805±4.35
ENSMUST00000113536 7.621±1.76 4.832±0.93 3.723±1.38
ENSMUST00000120618 10.485±1.65 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00082M CIL_00082M_0002 VISTA
CIL_0008RT CIL_0008RT_0002 VISTA
CIL_0007V9 CIL_0007V9_0002 VISTA
CIL_0001CS CIL_0001CS_0002 CGP
CIL_0001CL CIL_0001CL_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005847 IDA mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 IC mRNA polyadenylation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043328 fip1l1a protein_coding Danio_rerio
ENSDARG00000070431 fip1l1b protein_coding Danio_rerio
ENSG00000145216 FIP1L1 factor interacting with PAPOLA and CPSF1 protein_coding Homo_sapiens

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