ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029275 Gfi1 10090 - 5:107716657-107726036 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031205 Gfi1-002 107716657-107724343 protein_coding
  ENSMUST00000065478 Gfi1-201 107716666-107725805 protein_coding
  ENSMUST00000159164 Gfi1-001 107716657-107725805 protein_coding
  ENSMUST00000159263 Gfi1-003 107721606-107726036 protein_coding
  ENSMUST00000165344 Gfi1-202 107717224-107723961 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECENSMUST00000065478ENSMUST00000159164ENSMUST00000165344
Transcript ID C166 Tie2+ EC
ENSMUST00000065478 0.007±0.00 0.070±0.04
ENSMUST00000159164 0.005±0.00 0.023±0.00
ENSMUST00000165344 0.022±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005ZO CIL_0005ZO_0002 CGP
CIL_0007C9 CIL_0007C9_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0001078 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007638 IMP mechanosensory behavior
GO:0008270 IEA zinc ion binding
GO:0009996 IMP negative regulation of cell fate specification
GO:0010956 IEA negative regulation of calcidiol 1-monooxygenase activity
GO:0010977 ISS negative regulation of neuron projection development
GO:0016363 IEA nuclear matrix
GO:0016604 IEA nuclear body
GO:0017053 ISS transcriptional repressor complex
GO:0032088 IMP negative regulation of NF-kappaB transcription factor activity
GO:0034121 IEA regulation of toll-like receptor signaling pathway
GO:0042472 IMP inner ear morphogenesis
GO:0042491 IMP auditory receptor cell differentiation
GO:0042660 IMP positive regulation of cell fate specification
GO:0044212 IEA transcription regulatory region DNA binding
GO:0045165 IMP cell fate commitment
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0070105 IEA positive regulation of interleukin-6-mediated signaling pathway
GO:0071222 IEP cellular response to lipopolysaccharide

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044457 gfi1ab protein_coding Danio_rerio
ENSG00000162676 GFI1 growth factor independent 1 transcription repressor protein_coding Homo_sapiens

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