ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029279 Brdt 10090 + 5:107331159-107387058 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031215 Brdt-001 107331159-107387058 protein_coding
  ENSMUST00000112677 Brdt-003 107331175-107350741 protein_coding
  ENSMUST00000161377 Brdt-004 107331192-107342075 processed_transcript
  ENSMUST00000162804 Brdt-002 107359837-107386361 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000031215ENSMUST00000162804
Transcript ID C166 Tie2+ EC mES
ENSMUST00000031215 0.055±0.02 0.133±0.08 0.216±0.00
ENSMUST00000162804 0.106±0.07 0.875±0.26 0.295±0.14

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008DI CIL_0008DI_0002 VISTA
CIL_0008YV CIL_0008YV_0002 VISTA
CIL_0005ZR CIL_0005ZR_0002 CGP
CIL_0005ZS CIL_0005ZS_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001207 IMP histone displacement
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006338 IDA chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006397 IEA mRNA processing
GO:0007140 IMP male meiosis
GO:0007141 IMP male meiosis I
GO:0007283 IMP spermatogenesis
GO:0008380 IEA RNA splicing
GO:0030154 IEA cell differentiation
GO:0042393 IDA histone binding
GO:0043484 IMP regulation of RNA splicing
GO:0051039 IMP positive regulation of transcription during meiosis
GO:0070577 IMP lysine-acetylated histone binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000137948 BRDT bromodomain, testis-specific protein_coding Homo_sapiens

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