ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029389 Ddx55 10090 + 5:124552864-124569660 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071057 Ddx55-001 124552864-124569660 protein_coding
  ENSMUST00000111438 Ddx55-002 124552914-124569660 protein_coding
  ENSMUST00000131631 Ddx55-003 124552869-124567955 nonsense_mediated_decay
  ENSMUST00000136067 Ddx55-004 124552896-124560728 processed_transcript
  ENSMUST00000142451 Ddx55-005 124561899-124567875 processed_transcript
  ENSMUST00000144433 Ddx55-006 124552958-124560784 processed_transcript
  ENSMUST00000196021 Ddx55-007 124555661-124557090 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000071057ENSMUST00000131631
Transcript ID C166 Tie2+ EC mES
ENSMUST00000071057 4.244±0.32 1.608±0.43 2.634±0.56
ENSMUST00000131631 0.831±0.24 0.287±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003J8 CIL_0003J8_0002 CGP
CIL_000395 CIL_000395_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009864 ddx55 protein_coding Danio_rerio
ENSG00000111364 DDX55 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 protein_coding Homo_sapiens

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