ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029427 Zcchc8 10090 - 5:123698294-123721100 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031376 Zcchc8-201 123698302-123721044 protein_coding
  ENSMUST00000196001 Zcchc8-003 123710744-123720862 nonsense_mediated_decay
  ENSMUST00000196042 Zcchc8-008 123704538-123708482 retained_intron
  ENSMUST00000196282 Zcchc8-001 123698294-123721100 protein_coding
  ENSMUST00000196333 Zcchc8-004 123709195-123720823 nonsense_mediated_decay
  ENSMUST00000198826 Zcchc8-006 123704521-123719515 nonsense_mediated_decay
  ENSMUST00000199875 Zcchc8-002 123699799-123703418 retained_intron
  ENSMUST00000200161 Zcchc8-007 123708288-123714081 protein_coding
  ENSMUST00000200503 Zcchc8-005 123714090-123720774 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000031376ENSMUST00000198826ENSMUST00000199875
Transcript ID C166 Tie2+ EC mES
ENSMUST00000031376 6.652±1.20 1.480±0.62 5.327±0.65
ENSMUST00000198826 12.563±1.44 N/A N/A
ENSMUST00000199875 9.007±1.19 7.910±2.82 4.123±0.17

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002ZD CIL_0002ZD_0002 CGP
CIL_0002PD CIL_0002PD_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing
GO:0044822 IEA poly(A) RNA binding
GO:0071013 IEA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034982 zcchc8 protein_coding Danio_rerio
ENSG00000033030 ZCCHC8 zinc finger, CCHC domain containing 8 protein_coding Homo_sapiens

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