ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029580 Actb 10090 - 5:142903115-142906754 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000100497 Actb-001 142903115-142906754 protein_coding
  ENSMUST00000106216 Actb-006 142904705-142905937 protein_coding
  ENSMUST00000163829 Actb-004 142904672-142906722 protein_coding
  ENSMUST00000164765 Actb-005 142904873-142906694 retained_intron
  ENSMUST00000165629 Actb-008 142904766-142906672 retained_intron
  ENSMUST00000167386 Actb-003 142904395-142906725 processed_transcript
  ENSMUST00000167721 Actb-002 142903501-142906702 protein_coding
  ENSMUST00000171419 Actb-007 142904351-142905821 protein_coding
  ENSMUST00000196997 Actb-009 142903234-142903654 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000100497ENSMUST00000106216ENSMUST00000163829ENSMUST00000167386ENSMUST00000171419
Transcript ID C166 Tie2+ EC mES
ENSMUST00000100497 986.813±150.50 750.953±181.12 443.175±148.65
ENSMUST00000106216 N/A 1944.730±0.00 N/A
ENSMUST00000163829 N/A 2524.260±0.00 N/A
ENSMUST00000167386 N/A N/A 515.038±249.99
ENSMUST00000171419 346.499±2.90 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000854 CIL_000854_0002 VISTA
CIL_0002V9 CIL_0002V9_0002 CGP
CIL_0002V8 CIL_0002V8_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000790 IEA nuclear chromatin
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980 IEA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001895 IEA retina homeostasis
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005615 IEA extracellular space
GO:0005829 IDA cytosol
GO:0005925 IEA focal adhesion
GO:0007409 IEA axonogenesis
GO:0014069 IEA postsynaptic density
GO:0016020 IEA membrane
GO:0019894 IEA kinesin binding
GO:0019901 IEA protein kinase binding
GO:0021762 IEA substantia nigra development
GO:0030424 IEA axon
GO:0030529 IEA ribonucleoprotein complex
GO:0030863 IDA cortical cytoskeleton
GO:0030957 IEA Tat protein binding
GO:0031492 IEA nucleosomal DNA binding
GO:0035267 IEA NuA4 histone acetyltransferase complex
GO:0036464 IEA cytoplasmic ribonucleoprotein granule
GO:0043044 IEA ATP-dependent chromatin remodeling
GO:0043234 IEA protein complex
GO:0050998 IEA nitric-oxide synthase binding
GO:0070062 IEA extracellular vesicular exosome
GO:0070527 IEA platelet aggregation
GO:0070688 IEA MLL5-L complex
GO:0072562 IEA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000075624 ACTB actin, beta protein_coding Homo_sapiens

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