ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029833 Trim24 10090 + 6:37870811-37966296 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031859 Trim24-001 37870811-37966296 protein_coding
  ENSMUST00000120238 Trim24-003 37900487-37965932 protein_coding
  ENSMUST00000120428 Trim24-002 37870811-37966296 protein_coding
  ENSMUST00000123007 Trim24-007 37915221-37928008 retained_intron
  ENSMUST00000135387 Trim24-008 37948559-37953630 retained_intron
  ENSMUST00000149561 Trim24-004 37876330-37931484 processed_transcript
  ENSMUST00000149828 Trim24-006 37870811-37946799 retained_intron
  ENSMUST00000153004 Trim24-005 37870811-37921505 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000031859ENSMUST00000120238ENSMUST00000120428ENSMUST00000135387
Transcript ID C166 Tie2+ EC mES
ENSMUST00000031859 1.659±0.00 7.618±1.25 6.295±2.84
ENSMUST00000120238 2.443±0.44 5.896±1.23 N/A
ENSMUST00000120428 10.055±2.10 6.233±2.44 15.874±3.14
ENSMUST00000135387 N/A 12.408±3.55 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002Q4 CIL_0002Q4_0002 CGP
CIL_0002Q3 CIL_0002Q3_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002039 IPI p53 binding
GO:0003682 IDA chromatin binding
GO:0003713 ISS transcription coactivator activity
GO:0004672 IDA protein kinase activity
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005719 IDA nuclear euchromatin
GO:0005726 IDA perichromatin fibrils
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006468 IDA protein phosphorylation
GO:0008270 ISS zinc ion binding
GO:0008285 IGI negative regulation of cell proliferation
GO:0010628 IGI positive regulation of gene expression
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0016922 IDA ligand-dependent nuclear receptor binding
GO:0030163 IMP protein catabolic process
GO:0031647 IMP regulation of protein stability
GO:0034056 ISS estrogen response element binding
GO:0042981 IEA regulation of apoptotic process
GO:0043434 IEA response to peptide hormone
GO:0043565 IDA sequence-specific DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IGI positive regulation of transcription, DNA-templated
GO:0046777 IDA protein autophosphorylation
GO:0055074 IMP calcium ion homeostasis
GO:0070562 IMP regulation of vitamin D receptor signaling pathway
GO:0070577 ISS lysine-acetylated histone binding
GO:0071391 ISS cellular response to estrogen stimulus
GO:1901796 IGI regulation of signal transduction by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000122779 TRIM24 tripartite motif containing 24 protein_coding Homo_sapiens

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