ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031840 Rab3a 10090 + 8:70754679-70758677 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034301 Rab3a-001 70754711-70758635 protein_coding
  ENSMUST00000110090 Rab3a-003 70754724-70758635 protein_coding
  ENSMUST00000110092 Rab3a-002 70755510-70758635 protein_coding
  ENSMUST00000110093 Rab3a-004 70754679-70758677 protein_coding
  ENSMUST00000130468 Rab3a-006 70756457-70757700 retained_intron
  ENSMUST00000143118 Rab3a-005 70754703-70757262 protein_coding

Mus musculus Ensembl GRCm38

Genome
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Sequences
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Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000034301ENSMUST00000110090ENSMUST00000110093
Transcript ID C166 Tie2+ EC mES
ENSMUST00000034301 3.487±0.65 5.963±3.32 N/A
ENSMUST00000110090 N/A 1.387±0.00 N/A
ENSMUST00000110093 1.872±0.00 2.509±1.72 3.408±0.54

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006BA CIL_0006BA_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001669 IDA acrosomal vesicle
GO:0001671 IEA ATPase activator activity
GO:0003016 IMP respiratory system process
GO:0005515 IPI protein binding
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0007005 IMP mitochondrion organization
GO:0007264 IEA small GTPase mediated signal transduction
GO:0007274 IMP neuromuscular synaptic transmission
GO:0007409 IMP axonogenesis
GO:0008021 IDA synaptic vesicle
GO:0008022 IEA protein C-terminus binding
GO:0009791 IMP post-embryonic development
GO:0015031 IEA protein transport
GO:0016079 IMP:ISS synaptic vesicle exocytosis
GO:0016188 IMP synaptic vesicle maturation
GO:0017157 IDA regulation of exocytosis
GO:0030324 IMP lung development
GO:0030424 ISS axon
GO:0031489 IEA myosin V binding
GO:0031630 IMP regulation of synaptic vesicle fusion to presynaptic membrane
GO:0031982 IEA vesicle
GO:0032781 IEA positive regulation of ATPase activity
GO:0036465 ISS synaptic vesicle recycling
GO:0043195 IDA terminal bouton
GO:0043229 IEA intracellular organelle
GO:0043234 IEA protein complex
GO:0048172 IMP regulation of short-term neuronal synaptic plasticity
GO:0048489 TAS synaptic vesicle transport
GO:0048790 IMP maintenance of presynaptic active zone structure
GO:0050975 IMP sensory perception of touch
GO:0051020 IEA GTPase binding
GO:0051117 IEA ATPase binding
GO:0051602 IMP response to electrical stimulus
GO:1900271 TAS regulation of long-term synaptic potentiation
GO:1903307 IEA positive regulation of regulated secretory pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043835 rab3ab protein_coding Danio_rerio
ENSG00000105649 RAB3A RAB3A, member RAS oncogene family protein_coding Homo_sapiens

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