ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032232 Cgnl1 10090 - 9:71626509-71771602 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000072899 Cgnl1-201 71626509-71771602 protein_coding
  ENSMUST00000121322 Cgnl1-003 71626509-71771602 protein_coding
  ENSMUST00000122065 Cgnl1-001 71629211-71771560 protein_coding
  ENSMUST00000136044 Cgnl1-002 71630338-71631330 retained_intron
  ENSMUST00000146567 Cgnl1-005 71632633-71648350 processed_transcript
  ENSMUST00000152224 Cgnl1-004 71628859-71631109 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000072899ENSMUST00000121322
Transcript ID C166 Tie2+ EC mES
ENSMUST00000072899 4.677±0.58 26.184±16.51 16.563±9.25
ENSMUST00000121322 N/A 0.476±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0004P0 CIL_0004P0_0002 CGP
CIL_0004OZ CIL_0004OZ_0002 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003774 IEA motor activity
GO:0005923 IDA tight junction
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0015629 IDA actin cytoskeleton
GO:0016459 IEA myosin complex
GO:0043296 IDA apical junction complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015805 cgnl1 protein_coding Danio_rerio
ENSG00000128849 CGNL1 cingulin-like 1 protein_coding Homo_sapiens

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