ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032582 Rbm6 10090 - 9:107773559-107873237 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035201 Rbm6-001 107773559-107872829 protein_coding
  ENSMUST00000181986 Rbm6-003 107773567-107872763 nonsense_mediated_decay
  ENSMUST00000182092 Rbm6-008 107787580-107791161 retained_intron
  ENSMUST00000182242 Rbm6-005 107858252-107872722 retained_intron
  ENSMUST00000182301 Rbm6-007 107831627-107872744 retained_intron
  ENSMUST00000182445 Rbm6-010 107868841-107873237 retained_intron
  ENSMUST00000183032 Rbm6-002 107773563-107872821 protein_coding
  ENSMUST00000183035 Rbm6-004 107853322-107872421 protein_coding
  ENSMUST00000183152 Rbm6-009 107777956-107780301 retained_intron
  ENSMUST00000183179 Rbm6-006 107847212-107851433 retained_intron
  ENSMUST00000192474 Rbm6-014 107853360-107872771 processed_transcript
  ENSMUST00000193957 Rbm6-017 107800733-107872735 processed_transcript
  ENSMUST00000194250 Rbm6-013 107812097-107847326 processed_transcript
  ENSMUST00000194436 Rbm6-016 107787813-107791928 protein_coding
  ENSMUST00000195866 Rbm6-015 107853271-107872775 protein_coding
  ENSMUST00000195883 Rbm6-018 107791937-107872733 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000035201ENSMUST00000181986ENSMUST00000182242ENSMUST00000182301ENSMUST00000183032
Transcript ID C166 Tie2+ EC mES
ENSMUST00000035201 4.843±1.49 2.059±0.42 2.879±0.61
ENSMUST00000181986 N/A N/A 3.667±0.23
ENSMUST00000182242 N/A 3.209±0.22 N/A
ENSMUST00000182301 N/A 1.673±0.00 N/A
ENSMUST00000183032 9.435±0.73 5.273±1.40 4.531±1.95

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0005634 IDA nucleus
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077060 rbm6 protein_coding Danio_rerio
ENSG00000004534 RBM6 RNA binding motif protein 6 protein_coding Homo_sapiens

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