ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032869 Psmf1 10090 - 2:151715812-151744186 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042452 Psmf1-001 151715812-151741310 protein_coding
  ENSMUST00000109869 Psmf1-006 151718265-151744186 protein_coding
  ENSMUST00000123449 Psmf1-003 151727446-151741293 retained_intron
  ENSMUST00000125977 Psmf1-005 151716062-151720995 retained_intron
  ENSMUST00000151656 Psmf1-004 151719485-151729960 retained_intron
  ENSMUST00000155939 Psmf1-002 151716062-151741293 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000042452ENSMUST00000109869ENSMUST00000123449ENSMUST00000155939
Transcript ID C166 Tie2+ EC mES
ENSMUST00000042452 2.447±0.81 3.041±0.00 N/A
ENSMUST00000109869 15.271±1.17 11.797±3.05 13.481±3.26
ENSMUST00000123449 N/A 1.019±0.02 1.036±0.18
ENSMUST00000155939 4.743±0.92 1.152±0.00 2.150±0.13

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001ZT CIL_0001ZT_0002 CGP
CIL_0001ZN CIL_0001ZN_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0005829 ISS cytosol
GO:0006511 ISS ubiquitin-dependent protein catabolic process
GO:0016020 IEA membrane
GO:0070628 ISS proteasome binding
GO:1901799 ISS negative regulation of proteasomal protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022652 psmf1 protein_coding Danio_rerio
ENSG00000125818 PSMF1 proteasome (prosome, macropain) inhibitor subunit 1 (PI31) protein_coding Homo_sapiens

Loading