ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033295 Ptprf 10090 - 4:118208213-118291405 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049074 Ptprf-001 118208213-118291405 protein_coding
  ENSMUST00000123484 Ptprf-004 118208989-118217680 processed_transcript
  ENSMUST00000124758 Ptprf-003 118209010-118236016 protein_coding
  ENSMUST00000127616 Ptprf-006 118209860-118210741 processed_transcript
  ENSMUST00000143348 Ptprf-005 118226158-118231100 processed_transcript
  ENSMUST00000150096 Ptprf-002 118209005-118236445 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000049074ENSMUST00000124758
Transcript ID C166 Tie2+ EC mES
ENSMUST00000049074 64.564±5.82 1.432±0.83 10.332±5.69
ENSMUST00000124758 11.938±0.00 0.043±0.00 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 ISS protein tyrosine phosphatase activity
GO:0007155 IEA cell adhesion
GO:0008201 IEA heparin binding
GO:0016021 IEA integral component of membrane
GO:0016477 ISS cell migration
GO:0032403 IDA protein complex binding
GO:0035335 ISS peptidyl-tyrosine dephosphorylation
GO:0070062 IEA extracellular vesicular exosome
GO:1900121 ISS negative regulation of receptor binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005754 ptprfb protein_coding Danio_rerio
ENSG00000142949 PTPRF protein tyrosine phosphatase, receptor type, F protein_coding Homo_sapiens

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