ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033676 Gabrb3 10090 + 7:57419692-57828802 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039697 Gabrb3-001 57591162-57828802 protein_coding
  ENSMUST00000085240 Gabrb3-006 57419692-57828798 protein_coding
  ENSMUST00000136033 Gabrb3-005 57792128-57816315 retained_intron
  ENSMUST00000138350 Gabrb3-004 57591530-57816370 protein_coding
  ENSMUST00000156375 Gabrb3-003 57591173-57765781 retained_intron
  ENSMUST00000196198 Gabrb3-002 57590501-57827634 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECmESENSMUST00000039697
Transcript ID Tie2+ EC mES
ENSMUST00000039697 0.179±0.12 0.264±0.01

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006LH CIL_0006LH_0002 CGP
CIL_0007CV CIL_0007CV_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004890 ISS GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0005886 IDA plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0007214 ISO gamma-aminobutyric acid signaling pathway
GO:0007605 IMP sensory perception of sound
GO:0016021 IEA integral component of membrane
GO:0022851 ISS GABA-gated chloride ion channel activity
GO:0030054 IEA cell junction
GO:0034220 IEA ion transmembrane transport
GO:0034707 IEA chloride channel complex
GO:0043523 IMP regulation of neuron apoptotic process
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane
GO:0048666 IMP neuron development
GO:0060021 IMP palate development
GO:0060119 IMP inner ear receptor cell development
GO:0060384 IMP innervation
GO:0071420 ISS cellular response to histamine
GO:0090102 IMP cochlea development
GO:1901215 IMP negative regulation of neuron death
GO:1902476 ISS chloride transmembrane transport
GO:1902711 ISS GABA-A receptor complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023771 gabrb3 protein_coding Danio_rerio
ENSG00000166206 GABRB3 gamma-aminobutyric acid (GABA) A receptor, beta 3 protein_coding Homo_sapiens

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