ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033760 Rbm4b 10090 + 19:4756543-4767065 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036744 Rbm4b-001 4756571-4765940 protein_coding
  ENSMUST00000182065 Rbm4b-003 4756565-4761342 retained_intron
  ENSMUST00000182200 Rbm4b-002 4756581-4764130 nonsense_mediated_decay
  ENSMUST00000182324 Rbm4b-006 4764465-4765643 processed_transcript
  ENSMUST00000182821 Rbm4b-004 4756543-4762876 retained_intron
  ENSMUST00000183008 Rbm4b-005 4756564-4760701 processed_transcript
  ENSMUST00000183332 Rbm4b-007 4761396-4767065 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000036744ENSMUST00000182065
Transcript ID C166 Tie2+ EC mES
ENSMUST00000036744 4.246±0.41 2.450±0.15 N/A
ENSMUST00000182065 3.842±0.41 1.224±0.13 0.545±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003YM CIL_0003YM_0006 CGP
CIL_0003YM CIL_0003YM_0005 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0006417 IDA regulation of translation
GO:0007623 IDA circadian rhythm
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing
GO:0010628 IDA positive regulation of gene expression
GO:0032922 IDA circadian regulation of gene expression
GO:0043153 IDA entrainment of circadian clock by photoperiod
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022129 rbm4.3 protein_coding Danio_rerio
ENSDARG00000036386 rbm4.1 protein_coding Danio_rerio
ENSDARG00000055080 rbm4.2 protein_coding Danio_rerio
ENSG00000173914 RBM4B RNA binding motif protein 4B protein_coding Homo_sapiens

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