ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034023 Fancd2 10090 + 6:113531682-113597017 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036340 Fancd2-001 113531682-113597017 protein_coding
  ENSMUST00000101051 Fancd2-002 113531704-113538719 protein_coding
  ENSMUST00000123738 Fancd2-005 113551828-113562452 protein_coding
  ENSMUST00000124262 Fancd2-007 113583418-113586024 retained_intron
  ENSMUST00000129462 Fancd2-006 113568672-113574598 processed_transcript
  ENSMUST00000142453 Fancd2-004 113551824-113553990 processed_transcript
  ENSMUST00000143535 Fancd2-003 113531704-113537836 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000036340ENSMUST00000123738
Transcript ID C166 Tie2+ EC mES
ENSMUST00000036340 4.933±1.03 0.688±0.66 4.547±1.97
ENSMUST00000123738 N/A 0.677±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002D5 CIL_0002D5_0002 CGP
CIL_00059I CIL_00059I_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000793 IDA condensed chromosome
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005794 IEA Golgi apparatus
GO:0006281 IEA DNA repair
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0007129 IMP synapsis
GO:0007275 IEA multicellular organismal development
GO:0007276 IMP gamete generation
GO:0010332 IEA response to gamma radiation
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0070182 IEA DNA polymerase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053574 fancd2 protein_coding Danio_rerio
ENSG00000144554 FANCD2 Fanconi anemia, complementation group D2 protein_coding Homo_sapiens

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