ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034121 Mks1 10090 + 11:87853215-87863803 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038196 Mks1-001 87853215-87863803 protein_coding
  ENSMUST00000130135 Mks1-004 87853227-87859313 retained_intron
  ENSMUST00000135369 Mks1-003 87861937-87863261 retained_intron
  ENSMUST00000149256 Mks1-005 87856563-87857291 retained_intron
  ENSMUST00000153729 Mks1-002 87853665-87859313 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000038196ENSMUST00000130135
Transcript ID C166 Tie2+ EC mES
ENSMUST00000038196 2.031±0.44 0.847±0.49 3.438±0.40
ENSMUST00000130135 N/A 0.350±0.19 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0005814 IDA centriole
GO:0016020 IDA membrane
GO:0035869 IMP ciliary transition zone
GO:0036038 IDA TCTN-B9D complex
GO:0036064 IEA ciliary basal body
GO:0042384 IMP cilium assembly
GO:0048754 IMP branching morphogenesis of an epithelial tube
GO:0060271 IMP cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059657 mks1 protein_coding Danio_rerio
ENSG00000011143 MKS1 Meckel syndrome, type 1 protein_coding Homo_sapiens

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