ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034177 Rnf43 10090 + 11:87662722-87735539 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040089 Rnf43-002 87699897-87735539 protein_coding
  ENSMUST00000092800 Rnf43-001 87664274-87735539 protein_coding
  ENSMUST00000121782 Rnf43-010 87664549-87734540 protein_coding
  ENSMUST00000123658 Rnf43-008 87663087-87718459 processed_transcript
  ENSMUST00000124625 Rnf43-006 87729374-87731113 retained_intron
  ENSMUST00000134684 Rnf43-007 87662722-87729934 retained_intron
  ENSMUST00000150866 Rnf43-005 87733920-87734468 processed_transcript
  ENSMUST00000162740 Rnf43-009 87727426-87730526 retained_intron
  ENSMUST00000165679 Rnf43-201 87663087-87735538 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000040089ENSMUST00000092800ENSMUST00000121782ENSMUST00000123658ENSMUST00000134684
Transcript ID C166 Tie2+ EC mES
ENSMUST00000040089 N/A 0.034±0.00 0.203±0.10
ENSMUST00000092800 N/A 0.016±0.00 N/A
ENSMUST00000121782 0.011±0.00 N/A N/A
ENSMUST00000123658 0.019±0.00 0.147±0.00 0.226±0.00
ENSMUST00000134684 0.010±0.00 0.009±0.00 0.011±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005109 IEA frizzled binding
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0005887 ISS integral component of plasma membrane
GO:0008270 IEA zinc ion binding
GO:0016055 IEA Wnt signaling pathway
GO:0016567 ISS protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030178 ISS negative regulation of Wnt signaling pathway
GO:0038018 ISS Wnt receptor catabolic process
GO:0042787 ISS protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0072089 IMP stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000108375 RNF43 ring finger protein 43 protein_coding Homo_sapiens

Loading