ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034544 Rsrc1 10090 + 3:66981390-67358396 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046542 Rsrc1-005 66985703-67358390 protein_coding
  ENSMUST00000065047 Rsrc1-004 66985685-67353722 protein_coding
  ENSMUST00000065074 Rsrc1-002 66985672-67358395 protein_coding
  ENSMUST00000160504 Rsrc1-008 66985978-66994711 protein_coding
  ENSMUST00000161726 Rsrc1-007 66985967-67358396 protein_coding
  ENSMUST00000162036 Rsrc1-001 66981390-67356559 protein_coding
  ENSMUST00000162362 Rsrc1-009 66985670-66996473 protein_coding
  ENSMUST00000162620 Rsrc1-003 66985685-67085227 retained_intron
  ENSMUST00000162693 Rsrc1-006 66985704-67356558 protein_coding
  ENSMUST00000182708 Rsrc1-010 66990972-66994892 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000065074ENSMUST00000162036ENSMUST00000162620
Transcript ID C166 Tie2+ EC mES
ENSMUST00000065074 4.187±0.58 2.598±0.85 5.488±1.21
ENSMUST00000162036 3.521±0.38 2.820±0.37 N/A
ENSMUST00000162620 N/A 1.178±0.05 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007SK CIL_0007SK_0002 VISTA
CIL_0008TK CIL_0008TK_0002 VISTA
CIL_0007KJ CIL_0007KJ_0002 UCNEbase
CIL_00098J CIL_00098J_0002 VISTA
CIL_0007SC CIL_0007SC_0002 VISTA
CIL_0008QV CIL_0008QV_0002 VISTA
CIL_0008BN CIL_0008BN_0002 VISTA
CIL_00086V CIL_00086V_0002 VISTA
CIL_0008BM CIL_0008BM_0002 VISTA
CIL_0008KO CIL_0008KO_0002 VISTA
CIL_0004JW CIL_0004JW_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000380 IDA alternative mRNA splicing, via spliceosome
GO:0000398 IEA mRNA splicing, via spliceosome
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006468 IDA protein phosphorylation
GO:0006913 IDA nucleocytoplasmic transport
GO:0008380 ISO RNA splicing
GO:0016607 IDA nuclear speck
GO:0046677 IDA response to antibiotic

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033987 rsrc1 protein_coding Danio_rerio
ENSG00000174891 RSRC1 arginine/serine-rich coiled-coil 1 protein_coding Homo_sapiens

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