ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034755 Pcdh11x 10090 + X:120290259-120910619 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000050239 Pcdh11x-201 120290259-120906344 protein_coding
  ENSMUST00000113358 Pcdh11x-001 120290327-120910619 protein_coding
  ENSMUST00000113364 Pcdh11x-003 120290259-120906344 protein_coding
  ENSMUST00000155223 Pcdh11x-002 120401364-120906342 nonsense_mediated_decay
  ENSMUST00000191653 Pcdh11x-005 120401364-120906344 protein_coding
  ENSMUST00000192677 Pcdh11x-007 120364013-120910607 protein_coding
  ENSMUST00000192977 Pcdh11x-008 120290327-120292471 retained_intron
  ENSMUST00000193899 Pcdh11x-006 120364786-120410700 protein_coding
  ENSMUST00000195088 Pcdh11x-004 120290403-120906344 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECmESENSMUST00000113358ENSMUST00000155223ENSMUST00000191653ENSMUST00000192977ENSMUST00000193899ENSMUST00000195088
Transcript ID Tie2+ EC mES
ENSMUST00000113358 0.027±0.00 0.011±0.00
ENSMUST00000155223 N/A 0.039±0.00
ENSMUST00000191653 0.015±0.00 0.109±0.00
ENSMUST00000192977 N/A 0.015±0.00
ENSMUST00000193899 N/A 0.010±0.00
ENSMUST00000195088 0.029±0.00 0.036±0.03

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007B8 CIL_0007B8_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000099715 PCDH11Y protocadherin 11 Y-linked protein_coding Homo_sapiens
ENSG00000102290 PCDH11X protocadherin 11 X-linked protein_coding Homo_sapiens
ENSG00000279279 PCDH11Y protein_coding Homo_sapiens
ENSG00000279870 PCDH11Y protein_coding Homo_sapiens
ENSG00000280342 PCDH11Y protocadherin 11 Y-linked protein_coding Homo_sapiens

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