ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034837 Gnat1 10090 - 9:107674474-107679712 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000010205 Gnat1-001 107674474-107679712 protein_coding
  ENSMUST00000192271 Gnat1-003 107676974-107679585 nonsense_mediated_decay
  ENSMUST00000193188 Gnat1-004 107676935-107679614 retained_intron
  ENSMUST00000194153 Gnat1-005 107677374-107678335 processed_transcript
  ENSMUST00000194802 Gnat1-002 107674477-107679634 retained_intron
  ENSMUST00000195129 Gnat1-006 107676245-107678425 processed_transcript
  ENSMUST00000195849 Gnat1-007 107675297-107676441 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000010205ENSMUST00000192271ENSMUST00000193188ENSMUST00000194153ENSMUST00000195129ENSMUST00000195849
Transcript ID C166 Tie2+ EC mES
ENSMUST00000010205 0.168±0.09 0.122±0.10 0.051±0.01
ENSMUST00000192271 N/A N/A 0.325±0.00
ENSMUST00000193188 N/A 0.054±0.00 N/A
ENSMUST00000194153 N/A 0.683±0.13 0.847±0.31
ENSMUST00000195129 0.143±0.06 0.048±0.00 N/A
ENSMUST00000195849 0.185±0.10 0.117±0.08 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001580 IEA detection of chemical stimulus involved in sensory perception of bitter taste
GO:0001664 IBA G-protein coupled receptor binding
GO:0001750 IDA photoreceptor outer segment
GO:0001917 IEA photoreceptor inner segment
GO:0003924 IDA GTPase activity
GO:0004871 IBA signal transducer activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005834 IBA heterotrimeric G-protein complex
GO:0006184 IEA GTP catabolic process
GO:0007186 IDA G-protein coupled receptor signaling pathway
GO:0007188 IBA adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0007199 TAS G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger
GO:0007601 IMP visual perception
GO:0007602 IMP phototransduction
GO:0007603 IEA phototransduction, visible light
GO:0008283 IDA cell proliferation
GO:0009642 IEA response to light intensity
GO:0016020 TAS membrane
GO:0016056 IEA rhodopsin mediated signaling pathway
GO:0016324 IEA apical plasma membrane
GO:0031683 IDA G-protein beta/gamma-subunit complex binding
GO:0032391 IDA photoreceptor connecting cilium
GO:0042462 IMP eye photoreceptor cell development
GO:0043025 IEA neuronal cell body
GO:0046872 IEA metal ion binding
GO:0050908 IMP detection of light stimulus involved in visual perception
GO:0050917 IMP sensory perception of umami taste
GO:0051343 IEA positive regulation of cyclic-nucleotide phosphodiesterase activity
GO:0060041 IMP retina development in camera-type eye
GO:0071257 IMP cellular response to electrical stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044199 gnat1 protein_coding Danio_rerio
ENSG00000114349 GNAT1 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 protein_coding Homo_sapiens

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