ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035086 Becn1 10090 - 11:101285952-101302286 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041403 Becn1-002 101288262-101302286 nonsense_mediated_decay
  ENSMUST00000122817 Becn1-003 101288262-101302260 retained_intron
  ENSMUST00000126195 Becn1-011 101291383-101296307 nonsense_mediated_decay
  ENSMUST00000129863 Becn1-012 101290484-101301737 protein_coding
  ENSMUST00000130916 Becn1-001 101285952-101302286 protein_coding
  ENSMUST00000135805 Becn1-007 101289880-101292498 processed_transcript
  ENSMUST00000136535 Becn1-008 101288888-101294041 retained_intron
  ENSMUST00000137614 Becn1-009 101301461-101302241 retained_intron
  ENSMUST00000139669 Becn1-006 101298077-101302255 processed_transcript
  ENSMUST00000139997 Becn1-004 101288262-101302252 retained_intron
  ENSMUST00000140286 Becn1-010 101291530-101295436 retained_intron
  ENSMUST00000140706 Becn1-005 101295547-101302206 protein_coding
  ENSMUST00000164036 Becn1-016 101296226-101302240 retained_intron
  ENSMUST00000167667 Becn1-014 101288876-101302237 nonsense_mediated_decay
  ENSMUST00000167818 Becn1-017 101291499-101302238 nonsense_mediated_decay
  ENSMUST00000170502 Becn1-013 101295907-101302249 protein_coding
  ENSMUST00000172233 Becn1-015 101288418-101302251 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000041403ENSMUST00000122817ENSMUST00000130916ENSMUST00000139997ENSMUST00000167818
Transcript ID C166 Tie2+ EC mES
ENSMUST00000041403 24.800±2.78 9.973±1.11 14.363±1.35
ENSMUST00000122817 9.154±0.00 14.392±2.15 N/A
ENSMUST00000130916 N/A 1.300±0.00 N/A
ENSMUST00000139997 N/A 3.350±1.26 N/A
ENSMUST00000167818 23.684±1.20 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005SB CIL_0005SB_0002 CGP
CIL_0005S8 CIL_0005S8_0002 CGP
CIL_0005S9 CIL_0005S9_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000045 IEA autophagic vacuole assembly
GO:0000910 ISS cytokinesis
GO:0001666 IEA response to hypoxia
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005802 IDA trans-Golgi network
GO:0005856 ISS cytoskeleton
GO:0006914 IDA autophagy
GO:0007040 IMP lysosome organization
GO:0008285 IDA negative regulation of cell proliferation
GO:0016020 ISS membrane
GO:0016023 IDA cytoplasmic membrane-bounded vesicle
GO:0016239 IGI positive regulation of macroautophagy
GO:0030425 IEA dendrite
GO:0033197 IEA response to vitamin E
GO:0042493 IEA response to drug
GO:0043234 IDA protein complex
GO:0045335 IDA phagocytic vesicle
GO:0048666 IMP neuron development
GO:0050435 IMP beta-amyloid metabolic process
GO:0050790 IMP regulation of catalytic activity
GO:0051607 IEA defense response to virus
GO:0051707 IDA response to other organism
GO:0060548 IEA negative regulation of cell death
GO:0071275 IEA cellular response to aluminum ion
GO:0071364 IEA cellular response to epidermal growth factor stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079128 becn1 protein_coding Danio_rerio
ENSG00000126581 BECN1 beclin 1, autophagy related protein_coding Homo_sapiens

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