ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035277 Arx 10090 + X:93286445-93298357 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046565 Arx-001 93286496-93298357 protein_coding
  ENSMUST00000113947 Arx-002 93286510-93298062 protein_coding
  ENSMUST00000187010 Arx-003 93286445-93288382 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000046565ENSMUST00000113947
Transcript ID C166 Tie2+ EC mES
ENSMUST00000046565 0.221±0.11 0.077±0.01 N/A
ENSMUST00000113947 0.120±0.09 N/A 0.017±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007PA CIL_0007PA_0002 UCNEbase
CIL_0009CI CIL_0009CI_0002 VISTA
CIL_0008W6 CIL_0008W6_0002 VISTA
CIL_0008W7 CIL_0008W7_0002 VISTA
CIL_0008W8 CIL_0008W8_0002 VISTA
CIL_0008NM CIL_0008NM_0002 VISTA
CIL_0008NL CIL_0008NL_0002 VISTA
CIL_0008NF CIL_0008NF_0002 VISTA
CIL_0008NE CIL_0008NE_0002 VISTA
CIL_00084H CIL_00084H_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000980 IDA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001206 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001764 IMP neuron migration
GO:0003682 IDA chromatin binding
GO:0005634 IC nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007411 IMP axon guidance
GO:0021759 IMP globus pallidus development
GO:0021772 IMP olfactory bulb development
GO:0021800 IMP cerebral cortex tangential migration
GO:0021831 IMP embryonic olfactory bulb interneuron precursor migration
GO:0021846 IMP cell proliferation in forebrain
GO:0021853 IMP cerebral cortex GABAergic interneuron migration
GO:0030900 IMP forebrain development
GO:0042127 IMP regulation of cell proliferation
GO:0044241 IMP lipid digestion
GO:0046622 IMP positive regulation of organ growth
GO:0072148 IMP epithelial cell fate commitment

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058011 arxa protein_coding Danio_rerio
ENSG00000004848 ARX aristaless related homeobox protein_coding Homo_sapiens

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