ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036086 Zranb3 10090 - 1:127954184-128103047 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000086614 Zranb3-001 127954184-128102462 protein_coding
  ENSMUST00000097597 Zranb3-002 127987110-128103047 processed_transcript
  ENSMUST00000112538 Zranb3-005 127954670-128103001 protein_coding
  ENSMUST00000124876 Zranb3-003 128057856-128102454 retained_intron
  ENSMUST00000127393 Zranb3-004 127996466-128102463 retained_intron
  ENSMUST00000131732 Zranb3-006 127996853-128018693 processed_transcript
  ENSMUST00000143389 Zranb3-007 127965131-127972958 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000086614ENSMUST00000112538
Transcript ID C166 Tie2+ EC mES
ENSMUST00000086614 4.189±1.22 0.510±0.34 3.527±1.17
ENSMUST00000112538 0.559±0.08 0.303±0.06 0.644±0.14

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006VP CIL_0006VP_0002 CGP
CIL_0003S4 CIL_0003S4_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000733 IEA DNA strand renaturation
GO:0000737 IEA DNA catabolic process, endonucleolytic
GO:0003677 IEA DNA binding
GO:0004520 ISS endodeoxyribonuclease activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006281 ISS DNA repair
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0008270 IEA zinc ion binding
GO:0009411 ISS response to UV
GO:0031297 ISS replication fork processing
GO:0036292 ISS DNA rewinding
GO:0036310 ISS annealing helicase activity
GO:0043596 ISS nuclear replication fork
GO:0045910 ISS negative regulation of DNA recombination
GO:0048478 ISS replication fork protection
GO:0070530 ISS K63-linked polyubiquitin binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091538 zranb3 protein_coding Danio_rerio
ENSG00000121988 ZRANB3 zinc finger, RAN-binding domain containing 3 protein_coding Homo_sapiens

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