ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036192 Rorb 10090 - 19:18930605-19111196 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040153 Rorb-001 18930605-19001117 protein_coding
  ENSMUST00000112828 Rorb-002 18936563-19001117 protein_coding
  ENSMUST00000112832 Rorb-005 18930605-19111196 protein_coding
  ENSMUST00000147907 Rorb-004 18975980-19001111 retained_intron
  ENSMUST00000149635 Rorb-003 18975962-19001100 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000040153ENSMUST00000112828ENSMUST00000112832
Transcript ID C166 Tie2+ EC mES
ENSMUST00000040153 N/A 0.010±0.00 0.753±0.12
ENSMUST00000112828 N/A 0.132±0.00 N/A
ENSMUST00000112832 0.003±0.00 0.040±0.01 0.202±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0004879 IEA ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007601 IEA visual perception
GO:0008134 IPI transcription factor binding
GO:0008270 IEA zinc ion binding
GO:0030522 IEA intracellular receptor signaling pathway
GO:0035881 IMP amacrine cell differentiation
GO:0042462 IMP eye photoreceptor cell development
GO:0042752 IMP regulation of circadian rhythm
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IDA sequence-specific DNA binding
GO:0045668 IDA negative regulation of osteoblast differentiation
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046548 IMP retinal rod cell development
GO:0046549 IDA retinal cone cell development
GO:0048511 IEA rhythmic process
GO:0060041 IMP retina development in camera-type eye
GO:0071300 ISS cellular response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033498 rorb protein_coding Danio_rerio
ENSG00000198963 RORB RAR-related orphan receptor B protein_coding Homo_sapiens

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