ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036667 Tcaf1 10090 - 6:42668002-42710072 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045054 Tcaf1-001 42668002-42710067 protein_coding
  ENSMUST00000045140 Tcaf1-002 42671029-42693059 protein_coding
  ENSMUST00000121083 Tcaf1-003 42669942-42693087 protein_coding
  ENSMUST00000141794 Tcaf1-006 42690299-42693008 processed_transcript
  ENSMUST00000151021 Tcaf1-004 42685239-42710071 retained_intron
  ENSMUST00000152100 Tcaf1-007 42676695-42693003 retained_intron
  ENSMUST00000153952 Tcaf1-005 42709097-42710072 retained_intron
  ENSMUST00000165486 Tcaf1-008 42679025-42710071 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000045054ENSMUST00000045140ENSMUST00000121083
Transcript ID C166 Tie2+ EC mES
ENSMUST00000045054 3.981±1.37 4.270±0.33 2.383±0.00
ENSMUST00000045140 1.518±0.27 N/A 2.143±0.11
ENSMUST00000121083 8.694±2.67 7.570±2.76 4.069±0.43

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006OG CIL_0006OG_0004 CGP
CIL_00074N CIL_00074N_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009402 si:ch211-210b2.2 protein_coding Danio_rerio
ENSDARG00000095212 si:ch211-210b2.4 protein_coding Danio_rerio
ENSDARG00000096927 si:ch211-210b2.3 protein_coding Danio_rerio
ENSG00000198420 FAM115A family with sequence similarity 115, member A protein_coding Homo_sapiens

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