ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036928 Stag3 10090 + 5:138280240-138312393 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048028 Stag3-001 138280526-138312393 protein_coding
  ENSMUST00000159189 Stag3-009 138309201-138312386 nonsense_mediated_decay
  ENSMUST00000159483 Stag3-003 138280526-138312390 retained_intron
  ENSMUST00000160729 Stag3-005 138280240-138290751 protein_coding
  ENSMUST00000160849 Stag3-008 138304438-138309246 protein_coding
  ENSMUST00000161113 Stag3-002 138280509-138312393 retained_intron
  ENSMUST00000161615 Stag3-007 138299176-138301441 processed_transcript
  ENSMUST00000161691 Stag3-006 138280556-138290406 protein_coding
  ENSMUST00000162245 Stag3-004 138280544-138312393 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000048028ENSMUST00000159189ENSMUST00000159483ENSMUST00000160849ENSMUST00000161113ENSMUST00000161615ENSMUST00000161691ENSMUST00000162245
Transcript ID C166 Tie2+ EC mES
ENSMUST00000048028 N/A N/A 0.879±0.16
ENSMUST00000159189 N/A N/A 5.955±2.54
ENSMUST00000159483 0.033±0.00 0.140±0.00 0.552±0.12
ENSMUST00000160849 N/A 0.690±0.00 N/A
ENSMUST00000161113 N/A 0.085±0.00 0.869±0.09
ENSMUST00000161615 0.078±0.00 N/A N/A
ENSMUST00000161691 0.080±0.00 N/A N/A
ENSMUST00000162245 0.072±0.02 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008QI CIL_0008QI_0002 VISTA
CIL_0005CH CIL_0005CH_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000775 IEA chromosome, centromeric region
GO:0000794 IDA condensed nuclear chromosome
GO:0000795 IDA synaptonemal complex
GO:0000800 IDA lateral element
GO:0000802 IDA transverse filament
GO:0001673 IDA male germ cell nucleus
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005730 IEA nucleolus
GO:0007065 ISS male meiosis sister chromatid cohesion
GO:0007066 ISS female meiosis sister chromatid cohesion
GO:0030893 IDA meiotic cohesin complex
GO:0034991 IDA nuclear meiotic cohesin complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000066923 STAG3 stromal antigen 3 protein_coding Homo_sapiens

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