ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036990 Otud4 10090 + 8:79639618-79677724 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000172614 Otud4-006 79666823-79671378 protein_coding
  ENSMUST00000173078 Otud4-001 79639618-79677724 protein_coding
  ENSMUST00000173286 Otud4-002 79639704-79677672 protein_coding
  ENSMUST00000173300 Otud4-003 79651330-79659220 retained_intron
  ENSMUST00000173868 Otud4-004 79651742-79661243 retained_intron
  ENSMUST00000174485 Otud4-005 79661084-79668489 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000173078ENSMUST00000173286
Transcript ID C166 Tie2+ EC mES
ENSMUST00000173078 9.980±2.69 5.982±0.43 11.815±5.75
ENSMUST00000173286 9.919±1.39 4.007±1.62 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008YN CIL_0008YN_0002 VISTA
CIL_0006B8 CIL_0006B8_0002 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005575 ND cellular_component
GO:0006508 IEA proteolysis
GO:0044822 IEA poly(A) RNA binding
GO:0071108 ISS protein K48-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077810 otud4 protein_coding Danio_rerio
ENSG00000164164 OTUD4 OTU deubiquitinase 4 protein_coding Homo_sapiens

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