ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037098 Rab11fip3 10090 - 17:25989036-26069409 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000118828 Rab11fip3-002 25989036-26021860 protein_coding
  ENSMUST00000120691 Rab11fip3-001 25989045-26069409 protein_coding
  ENSMUST00000122103 Rab11fip3-004 25989036-26069177 protein_coding
  ENSMUST00000126306 Rab11fip3-005 26036271-26069235 processed_transcript
  ENSMUST00000144587 Rab11fip3-003 26003651-26021818 retained_intron
  ENSMUST00000148021 Rab11fip3-006 26013845-26018460 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000118828ENSMUST00000120691ENSMUST00000122103
Transcript ID C166 Tie2+ EC mES
ENSMUST00000118828 N/A 4.559±0.48 13.933±5.46
ENSMUST00000120691 2.501±0.36 2.771±0.01 N/A
ENSMUST00000122103 7.730±0.68 1.178±0.53 2.316±0.01

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000910 ISS cytokinesis
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005768 ISS endosome
GO:0005813 ISS centrosome
GO:0005815 IEA microtubule organizing center
GO:0016020 IDA membrane
GO:0017137 ISS Rab GTPase binding
GO:0030306 ISS ADP-ribosylation factor binding
GO:0030496 ISS midbody
GO:0032154 ISS cleavage furrow
GO:0032456 ISS endocytic recycling
GO:0042803 ISS protein homodimerization activity
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045171 IEA intercellular bridge
GO:0055037 ISS recycling endosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016490 rab11fip3 protein_coding Danio_rerio
ENSG00000090565 RAB11FIP3 RAB11 family interacting protein 3 (class II) protein_coding Homo_sapiens

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