ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037236 Matr3 10090 + 18:35562146-35593835 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000166793 Matr3-001 35562158-35593835 protein_coding
  ENSMUST00000186158 Matr3-012 35577901-35579276 retained_intron
  ENSMUST00000186292 Matr3-011 35562683-35572203 protein_coding
  ENSMUST00000186614 Matr3-010 35562689-35579293 protein_coding
  ENSMUST00000186796 Matr3-005 35562219-35590581 protein_coding
  ENSMUST00000187389 Matr3-008 35562445-35590738 protein_coding
  ENSMUST00000187543 Matr3-009 35562192-35572123 protein_coding
  ENSMUST00000187980 Matr3-016 35571927-35573707 retained_intron
  ENSMUST00000188275 Matr3-006 35562299-35590529 protein_coding
  ENSMUST00000188359 Matr3-015 35562146-35572490 protein_coding
  ENSMUST00000188767 Matr3-004 35562217-35590621 nonsense_mediated_decay
  ENSMUST00000189019 Matr3-014 35579027-35580726 retained_intron
  ENSMUST00000189039 Matr3-013 35562487-35579008 protein_coding
  ENSMUST00000190029 Matr3-007 35562453-35590464 protein_coding
  ENSMUST00000190121 Matr3-002 35562211-35591419 protein_coding
  ENSMUST00000190653 Matr3-003 35562211-35590598 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000166793ENSMUST00000186614ENSMUST00000187389ENSMUST00000190029ENSMUST00000190121ENSMUST00000190653
Transcript ID C166 Tie2+ EC mES
ENSMUST00000166793 N/A 4.574±0.00 7.938±0.40
ENSMUST00000186614 30.946±0.00 N/A 29.930±0.41
ENSMUST00000187389 31.025±7.97 N/A N/A
ENSMUST00000190029 17.644±4.38 12.858±2.91 N/A
ENSMUST00000190121 65.758±10.37 23.694±10.15 28.759±2.11
ENSMUST00000190653 N/A 20.372±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005D0 CIL_0005D0_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000394 matr3l1.1 protein_coding Danio_rerio
ENSG00000015479 MATR3 matrin 3 protein_coding Homo_sapiens

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