ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037286 Stag1 10090 + 9:100597798-100959375 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041418 Stag1-004 100643613-100958544 protein_coding
  ENSMUST00000122824 Stag1-014 100848161-100855814 retained_intron
  ENSMUST00000123302 Stag1-008 100643768-100957406 nonsense_mediated_decay
  ENSMUST00000123315 Stag1-010 100643613-100712690 retained_intron
  ENSMUST00000124487 Stag1-009 100597798-100737996 protein_coding
  ENSMUST00000129269 Stag1-001 100643448-100958545 protein_coding
  ENSMUST00000133388 Stag1-011 100643770-100776795 protein_coding
  ENSMUST00000138405 Stag1-005 100643616-100867293 nonsense_mediated_decay
  ENSMUST00000143150 Stag1-013 100834474-100849183 retained_intron
  ENSMUST00000143816 Stag1-003 100643600-100739597 retained_intron
  ENSMUST00000143955 Stag1-015 100889608-100951680 protein_coding
  ENSMUST00000144005 Stag1-012 100643613-100712709 retained_intron
  ENSMUST00000146312 Stag1-002 100643448-100796791 protein_coding
  ENSMUST00000146934 Stag1-006 100845050-100956834 protein_coding
  ENSMUST00000149771 Stag1-016 100796704-100957416 processed_transcript
  ENSMUST00000155108 Stag1-007 100643636-100957399 nonsense_mediated_decay
  ENSMUST00000191345 Stag1-017 100955769-100959375 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000041418ENSMUST00000123302ENSMUST00000129269ENSMUST00000146934ENSMUST00000149771
Transcript ID C166 Tie2+ EC mES
ENSMUST00000041418 2.027±0.52 7.212±2.17 3.413±1.15
ENSMUST00000123302 1.733±0.71 6.052±0.00 N/A
ENSMUST00000129269 2.598±0.54 8.187±0.97 7.608±1.64
ENSMUST00000146934 1.812±0.26 N/A 7.242±1.41
ENSMUST00000149771 1.944±0.43 8.512±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001C8 CIL_0001C8_0002 CGP
CIL_0000WP CIL_0000WP_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 IDA chromatin
GO:0003682 IDA chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0007059 IEA chromosome segregation
GO:0007067 IEA mitotic nuclear division
GO:0030054 IEA cell junction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061205 stag1a protein_coding Danio_rerio
ENSDARG00000062137 stag1b protein_coding Danio_rerio
ENSG00000118007 STAG1 stromal antigen 1 protein_coding Homo_sapiens

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