ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038095 Sbno1 10090 - 5:124368702-124426001 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000065263 Sbno1-201 124368702-124425914 protein_coding
  ENSMUST00000168651 Sbno1-007 124374532-124414527 protein_coding
  ENSMUST00000196329 Sbno1-004 124395923-124425957 protein_coding
  ENSMUST00000196644 Sbno1-003 124392968-124426001 protein_coding
  ENSMUST00000196647 Sbno1-009 124395923-124397122 retained_intron
  ENSMUST00000196711 Sbno1-013 124407097-124425584 protein_coding
  ENSMUST00000196842 Sbno1-017 124376124-124384809 retained_intron
  ENSMUST00000197228 Sbno1-011 124390257-124390908 retained_intron
  ENSMUST00000197723 Sbno1-010 124390905-124392416 retained_intron
  ENSMUST00000197777 Sbno1-015 124410341-124419887 protein_coding
  ENSMUST00000197974 Sbno1-006 124423510-124425542 retained_intron
  ENSMUST00000198285 Sbno1-016 124392966-124396257 retained_intron
  ENSMUST00000198420 Sbno1-014 124410109-124425568 protein_coding
  ENSMUST00000199004 Sbno1-002 124398607-124425592 nonsense_mediated_decay
  ENSMUST00000199245 Sbno1-012 124385984-124386956 retained_intron
  ENSMUST00000199808 Sbno1-001 124368708-124425610 protein_coding
  ENSMUST00000200474 Sbno1-005 124392950-124425593 protein_coding
  ENSMUST00000200674 Sbno1-008 124399980-124405729 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000065263ENSMUST00000168651ENSMUST00000199808
Transcript ID C166 Tie2+ EC mES
ENSMUST00000065263 3.162±0.76 2.487±1.75 3.568±1.28
ENSMUST00000168651 8.852±1.14 4.856±2.99 N/A
ENSMUST00000199808 2.540±1.00 N/A 3.842±0.96

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00084E CIL_00084E_0002 VISTA
CIL_0003J6 CIL_0003J6_0002 CGP
CIL_000665 CIL_000665_0002 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000139697 SBNO1 strawberry notch homolog 1 (Drosophila) protein_coding Homo_sapiens

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