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ANGIOGENES

ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038324 Trpc4ap 10090 - 2:155634271-155692384 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041059 Trpc4ap-001 155634271-155692384 protein_coding
  ENSMUST00000103140 Trpc4ap-002 155634308-155692332 protein_coding
  ENSMUST00000130755 Trpc4ap-004 155653104-155692382 retained_intron
  ENSMUST00000136764 Trpc4ap-006 155673057-155692123 processed_transcript
  ENSMUST00000140370 Trpc4ap-005 155643594-155663822 retained_intron
  ENSMUST00000143115 Trpc4ap-009 155635596-155637782 retained_intron
  ENSMUST00000146484 Trpc4ap-008 155638983-155640540 retained_intron
  ENSMUST00000147913 Trpc4ap-007 155665882-155668478 retained_intron
  ENSMUST00000152548 Trpc4ap-003 155638976-155673051 retained_intron
  ENSMUST00000153246 Trpc4ap-010 155634745-155637736 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000041059ENSMUST00000103140
Transcript ID C166 Tie2+ EC mES
ENSMUST00000041059 49.055±8.65 26.170±14.23 24.197±0.96
ENSMUST00000103140 8.255±0.11 5.104±2.72 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008EI CIL_0008EI_0002 VISTA
CIL_0005BE CIL_0005BE_0002 CGP
CIL_0006RZ CIL_0006RZ_0003 CGP
CIL_0006AB CIL_0006AB_0002 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006511 ISS ubiquitin-dependent protein catabolic process
GO:0016567 ISS protein ubiquitination
GO:0019902 ISS phosphatase binding
GO:0031464 ISS Cul4A-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018840 trpc4apa protein_coding Danio_rerio
ENSDARG00000020647 trpc4apb polymorphic_pseudogene Danio_rerio
ENSG00000100991 TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein protein_coding Homo_sapiens

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