ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038371 Sbf2 10090 - 7:110308013-110614922 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033058 Sbf2-201 110308022-110614920 protein_coding
  ENSMUST00000164525 Sbf2-012 110341327-110364586 protein_coding
  ENSMUST00000164559 Sbf2-011 110422447-110442293 protein_coding
  ENSMUST00000164599 Sbf2-013 110329933-110362145 protein_coding
  ENSMUST00000164759 Sbf2-001 110308013-110614922 protein_coding
  ENSMUST00000165449 Sbf2-003 110377256-110614914 retained_intron
  ENSMUST00000165992 Sbf2-009 110320741-110340285 retained_intron
  ENSMUST00000166020 Sbf2-002 110309398-110614761 protein_coding
  ENSMUST00000166885 Sbf2-010 110441474-110462932 protein_coding
  ENSMUST00000167652 Sbf2-008 110462876-110614761 nonsense_mediated_decay
  ENSMUST00000167880 Sbf2-006 110425626-110614882 retained_intron
  ENSMUST00000169740 Sbf2-005 110339184-110352241 retained_intron
  ENSMUST00000171218 Sbf2-007 110441287-110614905 protein_coding
  ENSMUST00000171378 Sbf2-004 110377567-110614896 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000164759ENSMUST00000166020
Transcript ID C166 Tie2+ EC mES
ENSMUST00000164759 5.960±0.89 11.582±3.96 4.067±1.02
ENSMUST00000166020 1.331±0.18 3.126±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0009CP CIL_0009CP_0002 VISTA
CIL_0004J8 CIL_0004J8_0002 CGP
CIL_0004J7 CIL_0004J7_0002 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005774 IDA vacuolar membrane
GO:0016020 IEA membrane
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0017112 IEA Rab guanyl-nucleotide exchange factor activity
GO:0019208 IDA phosphatase regulator activity
GO:0019902 IPI phosphatase binding
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0035091 IDA phosphatidylinositol binding
GO:0042803 IPI protein homodimerization activity
GO:0050790 IDA regulation of catalytic activity
GO:0051262 IPI protein tetramerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059460 sbf2 protein_coding Danio_rerio
ENSG00000133812 SBF2 SET binding factor 2 protein_coding Homo_sapiens

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