ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038671 Arfrp1 10090 - 2:181357690-181365404 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048269 Arfrp1-009 181359428-181365320 retained_intron
  ENSMUST00000108808 Arfrp1-002 181359100-181365351 protein_coding
  ENSMUST00000127988 Arfrp1-001 181357833-181365404 protein_coding
  ENSMUST00000130346 Arfrp1-011 181359502-181364811 retained_intron
  ENSMUST00000139368 Arfrp1-006 181359709-181365361 retained_intron
  ENSMUST00000145358 Arfrp1-007 181364290-181365351 retained_intron
  ENSMUST00000152334 Arfrp1-005 181357885-181360140 retained_intron
  ENSMUST00000152580 Arfrp1-004 181359315-181365334 retained_intron
  ENSMUST00000170190 Arfrp1-201 181357690-181365404 protein_coding
  ENSMUST00000183499 Arfrp1-008 181359715-181365338 nonsense_mediated_decay
  ENSMUST00000184859 Arfrp1-010 181361449-181365267 processed_transcript
  ENSMUST00000185118 Arfrp1-003 181357829-181365342 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000108808ENSMUST00000127988ENSMUST00000185118
Transcript ID C166 Tie2+ EC mES
ENSMUST00000108808 19.756±2.80 15.202±2.18 9.918±1.42
ENSMUST00000127988 N/A 6.872±2.93 4.153±0.00
ENSMUST00000185118 8.927±1.34 N/A 5.027±1.75

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003TZ CIL_0003TZ_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 ISO GTPase activity
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005794 IEA Golgi apparatus
GO:0005802 IEA trans-Golgi network
GO:0006184 ISO GTP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0007369 IMP gastrulation
GO:0016020 IDA membrane
GO:0034067 IEA protein localization to Golgi apparatus
GO:0042147 IEA retrograde transport, endosome to Golgi
GO:0043001 IEA Golgi to plasma membrane protein transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057857 arfrp1 protein_coding Danio_rerio
ENSG00000101246 ARFRP1 ADP-ribosylation factor related protein 1 protein_coding Homo_sapiens

Loading