ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038838 Vars2 10090 - 17:35655634-35667592 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043674 Vars2-001 35655634-35667592 protein_coding
  ENSMUST00000164295 Vars2-005 35656627-35658416 retained_intron
  ENSMUST00000164404 Vars2-004 35656557-35663026 nonsense_mediated_decay
  ENSMUST00000164978 Vars2-007 35664446-35666733 retained_intron
  ENSMUST00000165144 Vars2-008 35666202-35667549 nonsense_mediated_decay
  ENSMUST00000165787 Vars2-003 35655655-35666263 retained_intron
  ENSMUST00000168885 Vars2-010 35660029-35661648 retained_intron
  ENSMUST00000168922 Vars2-002 35656390-35663484 nonsense_mediated_decay
  ENSMUST00000169093 Vars2-011 35659688-35661969 nonsense_mediated_decay
  ENSMUST00000170701 Vars2-006 35656743-35657517 retained_intron
  ENSMUST00000171536 Vars2-009 35666118-35667540 retained_intron
  ENSMUST00000174129 Vars2-012 35659556-35660050 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000043674ENSMUST00000164978ENSMUST00000165144ENSMUST00000165787ENSMUST00000168922ENSMUST00000171536
Transcript ID C166 Tie2+ EC mES
ENSMUST00000043674 4.357±0.58 1.546±1.20 2.275±0.17
ENSMUST00000164978 N/A 0.604±0.00 N/A
ENSMUST00000165144 N/A 2.233±0.00 N/A
ENSMUST00000165787 N/A 0.311±0.04 0.995±0.00
ENSMUST00000168922 2.349±0.08 N/A N/A
ENSMUST00000171536 N/A 0.456±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00090O CIL_00090O_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002161 IEA aminoacyl-tRNA editing activity
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004832 IEA valine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006418 IEA tRNA aminoacylation for protein translation
GO:0006438 IEA valyl-tRNA aminoacylation
GO:0006450 IEA regulation of translational fidelity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056717 vars2 protein_coding Danio_rerio
ENSG00000137411 VARS2 valyl-tRNA synthetase 2, mitochondrial protein_coding Homo_sapiens

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