ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039117 Taf4a 10090 - 2:179912146-179976646 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041618 Taf4a-201 179912146-179976646 protein_coding
  ENSMUST00000131358 Taf4a-001 179912152-179975559 protein_coding
  ENSMUST00000154961 Taf4a-003 179922004-179929355 processed_transcript
  ENSMUST00000155335 Taf4a-002 179921228-179922208 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000041618ENSMUST00000131358
Transcript ID C166 Tie2+ EC mES
ENSMUST00000041618 1.812±0.00 0.484±0.00 4.209±0.67
ENSMUST00000131358 14.396±1.79 3.832±1.62 4.631±0.26

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000693 CIL_000693_0003 CGP
CIL_0001DN CIL_0001DN_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001541 IMP ovarian follicle development
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005669 ISO transcription factor TFIID complex
GO:0005737 IEA cytoplasm
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006367 IEA transcription initiation from RNA polymerase II promoter
GO:0033276 IEA transcription factor TFTC complex
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0046982 IEA protein heterodimerization activity
GO:0071339 IEA MLL1 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068192 taf4a protein_coding Danio_rerio
ENSG00000130699 TAF4 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa protein_coding Homo_sapiens

Loading