ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039860 Srrm3 10090 + 5:135806890-135874772 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000013615 Srrm3-003 135818106-135873109 nonsense_mediated_decay
  ENSMUST00000126232 Srrm3-005 135806897-135852219 protein_coding
  ENSMUST00000135615 Srrm3-006 135854414-135857509 retained_intron
  ENSMUST00000144211 Srrm3-001 135818106-135874772 protein_coding
  ENSMUST00000146038 Srrm3-004 135806890-135841953 retained_intron
  ENSMUST00000150566 Srrm3-007 135866617-135868209 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000013615ENSMUST00000126232ENSMUST00000135615ENSMUST00000144211ENSMUST00000146038
Transcript ID C166 Tie2+ EC mES
ENSMUST00000013615 N/A 0.048±0.00 N/A
ENSMUST00000126232 N/A 0.107±0.00 N/A
ENSMUST00000135615 0.050±0.00 N/A N/A
ENSMUST00000144211 0.013±0.01 0.052±0.01 0.045±0.01
ENSMUST00000146038 N/A 0.029±0.01 0.173±0.07

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006NT CIL_0006NT_0002 CGP
CIL_0006NG CIL_0006NG_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037965 srrm2 protein_coding Danio_rerio
ENSG00000177679 SRRM3 serine/arginine repetitive matrix 3 protein_coding Homo_sapiens

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