ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041528 Rnf123 10090 - 9:108051534-108083346 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047746 Rnf123-201 108051677-108079301 protein_coding
  ENSMUST00000159136 Rnf123-008 108055899-108079728 retained_intron
  ENSMUST00000159306 Rnf123-002 108052225-108059730 nonsense_mediated_decay
  ENSMUST00000159372 Rnf123-003 108077722-108083344 protein_coding
  ENSMUST00000159523 Rnf123-006 108051693-108052230 retained_intron
  ENSMUST00000159526 Rnf123-010 108052242-108052699 retained_intron
  ENSMUST00000160249 Rnf123-001 108051534-108083346 protein_coding
  ENSMUST00000160649 Rnf123-005 108052234-108079375 protein_coding
  ENSMUST00000160841 Rnf123-009 108058168-108061989 retained_intron
  ENSMUST00000161673 Rnf123-007 108051677-108079740 retained_intron
  ENSMUST00000161828 Rnf123-012 108071160-108078269 protein_coding
  ENSMUST00000162123 Rnf123-014 108056066-108057039 retained_intron
  ENSMUST00000162152 Rnf123-015 108071382-108073121 processed_transcript
  ENSMUST00000162355 Rnf123-004 108051672-108079301 protein_coding
  ENSMUST00000162516 Rnf123-011 108071446-108079266 protein_coding
  ENSMUST00000162753 Rnf123-013 108056560-108059765 nonsense_mediated_decay
  ENSMUST00000174504 Rnf123-016 108071219-108079305 protein_coding
  ENSMUST00000178267 Rnf123-202 108051677-108079375 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000159136ENSMUST00000159523ENSMUST00000160249ENSMUST00000160649ENSMUST00000162355ENSMUST00000178267
Transcript ID C166 Tie2+ EC mES
ENSMUST00000159136 N/A 0.984±0.00 N/A
ENSMUST00000159523 N/A 12.758±0.00 22.521±0.18
ENSMUST00000160249 2.305±0.75 1.452±0.45 3.590±1.55
ENSMUST00000160649 N/A 1.700±0.00 N/A
ENSMUST00000162355 1.944±0.00 2.410±1.06 N/A
ENSMUST00000178267 N/A 3.260±1.05 1.522±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007GV CIL_0007GV_0002 CGP
CIL_0005NE CIL_0005NE_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031269 rnf123 protein_coding Danio_rerio
ENSG00000164068 RNF123 ring finger protein 123 protein_coding Homo_sapiens

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