ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042328 Hps4 10090 + 5:112343083-112378414 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035279 Hps4-001 112343095-112378414 protein_coding
  ENSMUST00000112359 Hps4-003 112343083-112378414 protein_coding
  ENSMUST00000129839 Hps4-004 112368745-112369774 retained_intron
  ENSMUST00000133708 Hps4-002 112343095-112378414 retained_intron
  ENSMUST00000175718 Hps4-006 112343100-112344887 processed_transcript
  ENSMUST00000176737 Hps4-007 112343093-112344747 processed_transcript
  ENSMUST00000177121 Hps4-005 112375335-112378401 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000035279ENSMUST00000112359ENSMUST00000133708ENSMUST00000177121
Transcript ID C166 Tie2+ EC mES
ENSMUST00000035279 3.538±0.58 1.212±0.32 2.937±1.00
ENSMUST00000112359 2.321±0.29 0.888±0.40 1.322±0.00
ENSMUST00000133708 1.427±0.59 0.843±0.00 N/A
ENSMUST00000177121 N/A 3.491±0.00 26.246±8.42

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0005764 ISS lysosome
GO:0006605 ISS protein targeting
GO:0006996 IMP organelle organization
GO:0007040 ISS lysosome organization
GO:0007596 IMP blood coagulation
GO:0016020 ISS membrane
GO:0016023 IDA cytoplasmic membrane-bounded vesicle
GO:0030318 IMP melanocyte differentiation
GO:0031085 IEA BLOC-3 complex
GO:0042470 ISS melanosome
GO:0042803 ISS protein homodimerization activity
GO:0042827 IEA platelet dense granule
GO:0046983 ISS protein dimerization activity
GO:0050821 ISS protein stabilization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013795 hps4 protein_coding Danio_rerio
ENSG00000100099 HPS4 Hermansky-Pudlak syndrome 4 protein_coding Homo_sapiens

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