ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000043639 Rbm20 10090 + 19:53677306-53867080 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000095969 Rbm20-001 53677306-53843763 protein_coding
  ENSMUST00000161856 Rbm20-002 53843210-53867080 nonsense_mediated_decay
  ENSMUST00000162910 Rbm20-003 53793308-53813573 processed_transcript
  ENSMUST00000164202 Rbm20-201 53677306-53867080 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000095969ENSMUST00000161856ENSMUST00000162910ENSMUST00000164202
Transcript ID C166 Tie2+ EC mES
ENSMUST00000095969 0.064±0.00 1.036±0.00 0.431±0.00
ENSMUST00000161856 0.045±0.00 0.003±0.00 N/A
ENSMUST00000162910 N/A 0.072±0.00 N/A
ENSMUST00000164202 0.050±0.03 1.517±0.08 0.728±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008Q9 CIL_0008Q9_0002 VISTA
CIL_0006FC CIL_0006FC_0002 CGP
CIL_0000UM CIL_0000UM_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IDA RNA binding
GO:0005634 IDA nucleus
GO:0006397 IEA mRNA processing
GO:0007507 ISS heart development
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing
GO:0033120 IMP positive regulation of RNA splicing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000203867 RBM20 RNA binding motif protein 20 protein_coding Homo_sapiens

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