ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000043716 Rpl7 10090 - 1:16101295-16104662 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058437 Rpl7-001 16101295-16104662 protein_coding
  ENSMUST00000125005 Rpl7-004 16102491-16104384 retained_intron
  ENSMUST00000140597 Rpl7-006 16101295-16102082 processed_transcript
  ENSMUST00000141217 Rpl7-002 16101306-16104402 retained_intron
  ENSMUST00000149566 Rpl7-003 16101780-16104227 protein_coding
  ENSMUST00000151017 Rpl7-005 16101528-16102848 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000058437ENSMUST00000149566
Transcript ID C166 Tie2+ EC mES
ENSMUST00000058437 226.330±27.76 625.882±512.75 589.355±57.43
ENSMUST00000149566 350.142±57.74 46.284±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00011X CIL_00011X_0002 CGP
CIL_0005C3 CIL_0005C3_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 ISO DNA binding
GO:0003729 ISO mRNA binding
GO:0003735 IC structural constituent of ribosome
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005925 IEA focal adhesion
GO:0006364 IEA rRNA processing
GO:0006412 IC translation
GO:0016020 IEA membrane
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0030529 ISO ribonucleoprotein complex
GO:0042273 IEA ribosomal large subunit biogenesis
GO:0042803 ISO protein homodimerization activity
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007320 rpl7 protein_coding Danio_rerio
ENSG00000147604 RPL7 ribosomal protein L7 protein_coding Homo_sapiens

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