ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045103 Dmd 10090 + X:82948870-85206141 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000113991 Dmd-003 85048413-85205039 protein_coding
  ENSMUST00000113992 Dmd-007 85048413-85202498 protein_coding
  ENSMUST00000114000 Dmd-001 82948903-85206141 protein_coding
  ENSMUST00000123308 Dmd-013 85177936-85202837 processed_transcript
  ENSMUST00000127295 Dmd-014 82948870-83492739 retained_intron
  ENSMUST00000128983 Dmd-002 85048295-85055597 retained_intron
  ENSMUST00000132333 Dmd-004 85048319-85140736 retained_intron
  ENSMUST00000139998 Dmd-012 84076649-84309894 processed_transcript
  ENSMUST00000141261 Dmd-011 83927900-83928901 processed_transcript
  ENSMUST00000141778 Dmd-010 83855407-83887137 processed_transcript
  ENSMUST00000146331 Dmd-005 84599201-85144413 retained_intron
  ENSMUST00000147740 Dmd-009 83043402-83730331 retained_intron
  ENSMUST00000149433 Dmd-006 85048322-85144411 retained_intron
  ENSMUST00000156107 Dmd-008 84772711-84975707 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000113991ENSMUST00000113992ENSMUST00000127295ENSMUST00000149433
Transcript ID C166 Tie2+ EC mES
ENSMUST00000113991 8.194±1.21 1.359±1.22 0.420±0.13
ENSMUST00000113992 N/A N/A 0.221±0.00
ENSMUST00000127295 N/A 0.030±0.00 N/A
ENSMUST00000149433 4.221±0.71 N/A N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001954 IMP positive regulation of cell-matrix adhesion
GO:0002027 IMP regulation of heart rate
GO:0003779 IEA actin binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005856 IEA cytoskeleton
GO:0005886 IDA plasma membrane
GO:0006355 IMP regulation of transcription, DNA-templated
GO:0007517 IMP muscle organ development
GO:0007519 IGI skeletal muscle tissue development
GO:0008065 IMP establishment of blood-nerve barrier
GO:0008270 IEA zinc ion binding
GO:0010468 IMP regulation of gene expression
GO:0010880 IMP regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
GO:0010881 IMP regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion
GO:0014809 IMP regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion
GO:0014819 IMP regulation of skeletal muscle contraction
GO:0014904 IMP myotube cell development
GO:0016010 IDA dystrophin-associated glycoprotein complex
GO:0021629 IMP olfactory nerve structural organization
GO:0030018 IDA Z disc
GO:0030055 IDA cell-substrate junction
GO:0033137 IMP negative regulation of peptidyl-serine phosphorylation
GO:0034613 IMP cellular protein localization
GO:0042383 IDA sarcolemma
GO:0043234 ISO protein complex
GO:0043623 IMP cellular protein complex assembly
GO:0044306 IDA neuron projection terminus
GO:0045121 IDA membrane raft
GO:0045202 IDA synapse
GO:0045211 IEA postsynaptic membrane
GO:0045213 IMP neurotransmitter receptor metabolic process
GO:0046716 IMP muscle cell cellular homeostasis
GO:0048747 IGI muscle fiber development
GO:0050998 IPI nitric-oxide synthase binding
GO:0051647 IMP nucleus localization
GO:0060314 IMP regulation of ryanodine-sensitive calcium-release channel activity
GO:0060857 IMP establishment of glial blood-brain barrier
GO:0086001 IMP cardiac muscle cell action potential
GO:1901385 IMP regulation of voltage-gated calcium channel activity
GO:1902083 IMP negative regulation of peptidyl-cysteine S-nitrosylation
GO:2000651 IMP positive regulation of sodium ion transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008487 dmd protein_coding Danio_rerio
ENSG00000198947 DMD dystrophin protein_coding Homo_sapiens

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