ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047821 Trim16 10090 + 11:62820231-62850808 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055006 Trim16-001 62820231-62842936 protein_coding
  ENSMUST00000072639 Trim16-004 62820253-62850808 protein_coding
  ENSMUST00000108703 Trim16-002 62820469-62842936 protein_coding
  ENSMUST00000128623 Trim16-005 62833800-62841457 processed_transcript
  ENSMUST00000147942 Trim16-003 62820440-62821245 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000055006ENSMUST00000072639ENSMUST00000108703ENSMUST00000128623ENSMUST00000147942
Transcript ID C166 Tie2+ EC mES
ENSMUST00000055006 0.544±0.23 7.924±7.28 N/A
ENSMUST00000072639 0.311±0.11 12.741±0.00 N/A
ENSMUST00000108703 0.309±0.01 4.902±3.44 0.060±0.00
ENSMUST00000128623 0.255±0.03 1.883±0.00 0.087±0.04
ENSMUST00000147942 N/A N/A 0.073±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008QF CIL_0008QF_0002 VISTA
CIL_0000DU CIL_0000DU_0002 CGP
CIL_0005CX CIL_0005CX_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010673 trim16 protein_coding Danio_rerio
ENSG00000108448 TRIM16L tripartite motif containing 16-like protein_coding Homo_sapiens
ENSG00000221926 TRIM16 tripartite motif containing 16 protein_coding Homo_sapiens

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