ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048495 Tyw5 10090 - 1:57388237-57407101 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000079998 Tyw5-004 57388240-57406674 nonsense_mediated_decay
  ENSMUST00000097732 Tyw5-002 57388240-57406471 retained_intron
  ENSMUST00000160118 Tyw5-006 57391429-57406471 nonsense_mediated_decay
  ENSMUST00000160837 Tyw5-007 57388666-57406443 protein_coding
  ENSMUST00000161092 Tyw5-008 57388686-57391740 retained_intron
  ENSMUST00000161727 Tyw5-010 57388416-57393698 retained_intron
  ENSMUST00000161780 Tyw5-003 57393185-57406537 retained_intron
  ENSMUST00000162663 Tyw5-011 57388405-57390771 processed_transcript
  ENSMUST00000162686 Tyw5-001 57388237-57407101 protein_coding
  ENSMUST00000163039 Tyw5-009 57390712-57401522 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000079998ENSMUST00000162663
Transcript ID C166 Tie2+ EC mES
ENSMUST00000079998 5.383±0.86 3.162±0.65 6.568±1.33
ENSMUST00000162663 N/A 8.250±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002K2 CIL_0002K2_0002 CGP
CIL_0000JI CIL_0000JI_0003 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 ISS tRNA binding
GO:0005506 ISS iron ion binding
GO:0005575 ND cellular_component
GO:0016706 ISS oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0031591 ISS wybutosine biosynthetic process
GO:0042803 ISS protein homodimerization activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069672 tyw5 protein_coding Danio_rerio
ENSG00000162971 TYW5 tRNA-yW synthesizing protein 5 protein_coding Homo_sapiens

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