ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048763 Hoxb3 10090 + 11:96323326-96347930 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055334 Hoxb3-001 96343769-96346507 protein_coding
  ENSMUST00000093944 Hoxb3-002 96323326-96347930 protein_coding
  ENSMUST00000123091 Hoxb3-003 96328062-96344303 protein_coding
  ENSMUST00000143462 Hoxb3-004 96340945-96341774 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECENSMUST00000093944
Transcript ID C166 Tie2+ EC
ENSMUST00000093944 2.334±0.41 1.122±1.08

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007ZM CIL_0007ZM_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000979 IDA RNA polymerase II core promoter sequence-specific DNA binding
GO:0001525 IEA angiogenesis
GO:0002244 IMP hematopoietic progenitor cell differentiation
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0009952 IGI anterior/posterior pattern specification
GO:0021546 IDA rhombomere development
GO:0021615 IGI glossopharyngeal nerve morphogenesis
GO:0030878 IGI thyroid gland development
GO:0048704 IGI embryonic skeletal system morphogenesis
GO:0050767 IDA regulation of neurogenesis
GO:0051216 IGI cartilage development
GO:0060216 IGI definitive hemopoiesis
GO:0060324 IDA face development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029263 hoxb3a protein_coding Danio_rerio
ENSG00000120093 HOXB3 homeobox B3 protein_coding Homo_sapiens

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