ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048874 Phf3 10090 - 1:30802339-30873921 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000088310 Phf3-201 30802342-30863256 protein_coding
  ENSMUST00000185521 Phf3-011 30829431-30830743 retained_intron
  ENSMUST00000185604 Phf3-013 30872652-30873475 retained_intron
  ENSMUST00000186105 Phf3-002 30813571-30873695 retained_intron
  ENSMUST00000186733 Phf3-003 30802339-30873581 protein_coding
  ENSMUST00000187316 Phf3-005 30811904-30813535 retained_intron
  ENSMUST00000187600 Phf3-008 30824416-30863070 processed_transcript
  ENSMUST00000187968 Phf3-012 30863070-30873252 protein_coding
  ENSMUST00000188780 Phf3-007 30831205-30873894 protein_coding
  ENSMUST00000188847 Phf3-004 30821058-30823843 retained_intron
  ENSMUST00000190190 Phf3-009 30806205-30809105 retained_intron
  ENSMUST00000191064 Phf3-006 30820226-30873804 nonsense_mediated_decay
  ENSMUST00000191245 Phf3-001 30815315-30873921 retained_intron
  ENSMUST00000191329 Phf3-010 30803546-30810712 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000088310ENSMUST00000186733ENSMUST00000191329
Transcript ID C166 Tie2+ EC mES
ENSMUST00000088310 8.566±2.40 6.960±1.07 3.954±0.91
ENSMUST00000186733 5.688±1.66 1.850±0.00 3.469±0.00
ENSMUST00000191329 5.378±0.77 3.279±0.22 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034768 phf3 protein_coding Danio_rerio
ENSG00000118482 PHF3 PHD finger protein 3 protein_coding Homo_sapiens

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